My list of publications is available on Google Scholar.

2025

Monod, Micheli and Bhatt. “NeuralSurv: Deep Survival Analysis with Bayesian Uncertainty Quantification”. arXiv. (2025)

Micheli, Monod and Bhatt. “Diffusion Models for Inverse Problems in the Exponential Family”. arXiv. (2025)

2024

Monod, Krusche, Cao, et al. “TorchSurv: A Lightweight Package for Deep Survival Analysis”. Journal of Open Source Software 9, 7341, (2024)

Micheli and Monod. “Deep Reinforcement Learning for Online Optimal Execution Strategies”. arXiv. (2024)

Monod, Brizzi, Galiwango, et al. “Longitudinal population-level HIV epidemiologic and genomic surveillance highlights growing gender disparity of HIV transmission in Uganda”. Nature Microbiology, 1-20 (2024)

2023

Monod, Blenkinsop, Brizzi, et al. “Regularised B-splines Projected Gaussian Process Priors to Estimate Time-trends in Age-specific COVID-19 Deaths”, Bayesian Analysis, 18 (3), 957-987 (2023)

Dan, Chen, Monod, et al. “Estimating fine age structure and time trends in human contact patterns from coarse contact data: The Bayesian rate consistency model”, PLOS Computational Biology 19 (6), e1011191, 1, (2023)

Mellan, Hoeltgebaum, Mishra, et al. “Subnational analysis of the initial phase of the COVID-19 epidemic in Brazil”., ICLR, (2023)

2022

Blenkinsop, Monod, van Sighem, et al. “Estimating the potential to prevent locally acquired HIV infections in a UNAIDS Fast-Track City, Amsterdam”. Elife 11, e76487, 2, (2022)

Brizzi, Whittaker, Servo, et al. “Spatial and temporal fluctuations in COVID-19 fatality rates in Brazilian hospitals”. Nature medicine 28 (7), 1476-1485, 23, (2022)

2021

Monod, Blenkinsop, Xi, et al. “Age groups that sustain resurging COVID-19 epidemics in the United States”. Science 371 (6536), eabe8372, 261, (2021)

Mousa, Peter, Watson, Ratmann, Monod et al. “Social contact patterns and implications for infectious disease transmission: a systematic review and meta-analysis of contact surveys”. eLife, 10, 25, (2021)

Mishra, Scott, Laydon, et al. “Comparing the responses of the UK, Sweden and Denmark to COVID-19 using counterfactual modelling”. Scientific Reports 11 (1), 16342, 35, (2021)

Faria, Mellan, Whittaker, et al. “Genomics and epidemiology of the P. 1 SARS-CoV-2 lineage in Manaus, Brazil”. Science 372 (6544), 815-821, 1313, (2021)

2020

Unwin, Mishra, Bradley, et al. “State-level tracking of COVID-19 in the United States”. Nature communications 11 (1), 6189, 156, (2020)

Flaxman, Mishra, Gandy, et al. “Estimating the effects of non-pharmaceutical interventions on COVID-19 in Europe”. Nature 584 (7820), 257-261, 3026, (2020)